ArticleViewAbstractPharmacognosy Journal,2024,16,4,738-743.DOI:10.5530/pj.2024.16.123Published:August 2024Type:Original ArticleComparative Analysis Molecular Simulation IL6R Alpha with TCZ and HIL6: Mechanism in Inflammatory ResponsesEngla Merizka, Septelia Inawati Wanandi, Budiman Bela, Silvia Tri Widyaningtyas, and Fadilah Fadilah Engla Merizka1,2, Septelia Inawati Wanandi3,4*, Budiman Bela5,6, Silvia Tri Widyaningtyas6, Fadilah Fadilah7,8 1Doctoral Program in Biomedical Science, Faculty of Medicine, Universitas Indonesia, 10430 Jakarta, INDONESIA. 2Diploma Programs for Medical Technology, Faculty of Pharmacy and Science, Universitas Muhammadiyah Prof.DR.HAMKA, Jakarta, INDONESIA. 3Molecular Biology and Proteomics Core Facilities, Indonesian Medical Education and Research Institute, Faculty of Medicine, Universitas Indonesia, Jakarta 10430, INDONESIA. 4Department of Biochemistry and Molecular Biology, Faculty of Medicine, Universitas Indonesia, Jakarta 10430, INDONESIA. 5Department of Microbiology, Faculty of Medicine, Universitas Indonesia, INDONESIA. 6Virology and Cancer Pathobiology Research Center, Faculty of Medicine, Universitas Indonesia, 10430 Jakarta, INDONESIA. 7Department of Medical Chemistry, Faculty of Medicine, Universitas Indonesia, Jalan Salemba Raya number 4, Jakarta 10430, INDONESIA. 8Bioinformatics Core Facilities - IMERI, Faculty of Medicine, Universitas Indonesia, Jalan Salemba Raya number 6, Jakarta 10430, INDONESIA. Abstract: Introduction: In cases of inflammation, there is typically a connection between IL6R and HIL6. If there is an excessive level of activity in this connection, it can lead to a cytokine storm. Tocilizumab (TCZ), also known as AntiIL-6R, is a biologic drug that is a recombinant humanized monoclonal antibody. It is specifically used to treat inflammatory and autoimmune diseases that are associated with cytokine storms. Method: This study utilizes in silico analysis to assess the ability of TCZ, a biosimilar, to block IL6R and compares it to the blocking effect of HIL6. Validation of the 3D structure of the IL6R was performed using a Ramachandran plot. Results: The IL6R alpha subunit had a validation score of 97.86%, while the IL6R beta subunit had a validation value of 95.54%. The molecular docking analysis reveals that the TCZ light chain forms a complex with IL6R, yielding a docking score of -16.4 kcal mol-1. Similarly, the TCZ heavy chain also interacts with IL6R, resulting in a docking value of -15.5 kcal mol-1. Notably, both scores are higher than the docking score of the control, which involves IL6R with HIL6, measuring -12.5 kcal mol- 1. The root mean square fluctuation (RMSF) value of the IL6R protein in the presence of TCZ (Tocilizumab) is consistently below 2, with an average range of 0.04-0.09. Conclusion: The affinity between IL6R and TCZ is greater than the affinity between IL6R and HIL6. Keywords:Binding affinity, HIL6, IL6, IL6R, Molecular docking, Molecular dynamics.View:PDF (758.14 KB) PDF Images Molecular Dynamic Analysis. ‹ Cheminformatic and in vitro Bioprospection of Capsicum Annuum L. Metabolites as DNA Gyrase B Inhibitors up Effects of ADCES7 Self Care Behavior Application and Acupressure on Changes in Blood Glucose Levels in Obesive, Prediabetic Women ›